Showing : RNA Seq • reset
0
votes
9
replies
2.6k
views
How to create manhattan plot with DESeq2
deseq2 mahattan plot RNA Seq
updated 3.6 years ago by ▴ 150 • written 4.6 years ago by • 0
1
vote
5
replies
1.3k
views
Time course experiment using limma with voom
limma voom RNA Seq Time-course experiments
updated 4.9 years ago by ★ 28k • written 4.9 years ago by • 0
2
votes
5
replies
3.3k
views
Possible batch effect correction with RNA-Seq data when the batches do not contain both biological conditions for DE analysis
batch effect limma rna seq DE
updated 4.1 years ago by ★ 13k • written 4.1 years ago by ▴ 830
1
vote
4
replies
903
views
Difference between Fold Changes from EdgeR glmLRTest and directly calculated fold changes.
edger RNA Seq
updated 4.5 years ago by 65k • written 4.5 years ago by ▴ 30
3
votes
3
replies
892
views
Custom gene annotations for SGSeq
sgseq alternative splicing rna seq
updated 4.5 years ago by ▴ 200 • written 4.5 years ago by • 0
5
votes
3
replies
976
views
Steep dendrograms and few modules. WGCNA on RNA seq data
RNA seq wgcna
updated 4.9 years ago by ★ 3.0k • written 4.9 years ago by ▴ 20
0
votes
3
replies
653
views
Normalization of RNA seq data
RNA seq cpm
updated 4.1 years ago by ★ 3.9k • written 4.1 years ago by • 0
0
votes
2
replies
783
views
using only uniquely-mapping reads for alternative splicing using SGSeq
rna seq SGSeq Alternative splicing
updated 4.6 years ago by ▴ 200 • written 4.6 years ago by • 0
1
vote
2
replies
1.9k
views
adapter trimming paired vs unpaired reads
rna seq trimmomatic trimming adapter trimming paired analysis
5.0 years ago Mozart ▴ 30
0
votes
2
replies
953
views
Need help cprrecting overlappinge genes on valcano plot
volcano plot rna seq
updated 4.7 years ago by 42k • written 4.7 years ago by • 0
0
votes
1
reply
552
views
51 views DESeq2 RNAseq differential expression analysis
deseq2 likelihood ratio rna seq wald test
updated 4.7 years ago by 42k • written 4.7 years ago by • 0
0
votes
0
replies
497
views
searching for specific RNA sequences
rna seq
4.5 years ago adeler001 • 0
0
votes
0
replies
1.6k
views
Sub clustering from hierarchical cluster used to make heat map of gene expression data
heatmap.2 hierarchical clustering microarray RNA seq DEG
6.2 years ago lawarde.ankita1 ▴ 30
13 results • Page 1 of 1
Recent ...
Replies
Comment: More regions in union when increasing DBA$config$mergeOverlap by Ziliang • 0
I am so confused and frustrated learning to use this software. Isn't how you merge the peaksets one of the most important steps for the com…
Answer: SingleR Label.Ont by Denis • 0
[Jackpot City Casino][1] is the perfect option when looking for an online casino in Canada for an exciting vacation and huge winnings that …
Comment: deseq2 results by sajadahmad41454 • 0
thank you so much and sorry for bothering you again and again, it is urgent because it is my project deadline. i have removed that sample a…
Comment: deseq2 results by swbarnes2 ★ 1.4k
Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …
Comment: Can't post a question containing code? by NATASHA • 0
did you find a solution? I´m having the same problem
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
Awards • All
Popular Question to Gordon Smyth 50k
Popular Question to maria.soler • 0
Popular Question to Pietro ▴ 40
Popular Question to neilzhao ▴ 30
Popular Question to ATpoint ★ 4.1k
Locations • All
United States, 2 minutes ago
South Korea, 9 minutes ago
France, 27 minutes ago
WEHI, Melbourne, Australia, 56 minutes ago
The city by the bay, 1 hour ago
Traffic: 348 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6